We received a consultation from a customer about a machine for bioinformatics, especially next-generation sequencer analysis.
The budget is about 4 million yen, with the basic condition being a configuration equipped with a 120TB SSD that has expandability in the future. I would like a configuration that can mainly handle next-generation sequencer analysis using Cell Ranger, STAR, bowtie2, etc., and downstream analysis / chart creation using R, etc.
In addition, since there is a possibility of machine learning, we are also requesting the installation of a GPU.
Based on your budget and other conditions, our proposal uses Ryzen Threadripper.
The memory is 256GB, which is the maximum capacity of this configuration, and the ECC module is adopted.If cost is important, you can change to a regular DIMM without ECC function.
Also, since we have a plan for machine learning, we have installed RTX3080 as a GPU.
Using Cell Ranger, STAR, bowtie2, etc. does not require any special drawing ability, so you can reduce the cost by replacing it with a cheaper video card.
If you wish, please feel free to contact us.
【Main Specifications】
| CPU | Threadripper3 3970X (3.70GHz 32 cores) |
| memory | 256GB ECC UDIMMs |
| Storage 1 | 4TB SSD S-ATA |
| Storage 2 | 16TB HDD S-ATA |
| video | NVIDIA Geforce RTX3080 |
| network | on board (10Gigabit x1 / 2.5Gigabit x1) |
| Housing + power supply | Middle tower case + 850W |
| OS | Ubuntu 20.04 |
This case study is based on the RADIC 1CPU Model.
Simulation of estimated price due to specification change Click here for more information.for more information.
* Due to RADIC model changes, etc., it may not be possible to select the same specifications as the configuration of the case.We apologize for the inconvenience, but please be aware in advance.
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■ Click here for details and inquiries about this PC case |
