A customer involved in agriculture-related research asked us about a PC for performing metagenomic analysis.
We plan to use NGS data quality filtering, assembling, binning, KEGG and BLAST.
Your requirements are as follows.
・CPU: About Xeon Gold 6326 |
I would like a spec that can use all the programs commonly used in metagenomic analysis.
Also, MetaWRAP needs a lot of memory capacity for assembly, so we hear that you want to give priority to memory capacity.
【Main Specifications】
CPU | Xeon Gold 6326 (2.90GHz 16 cores) |
memory | 512GB |
Storage 1 | 2TB SSD S-ATA x2 |
Storage 2 | 8TB HDD S-ATA x2 |
video | Nvidia T1000 |
network | On Board (1000Base-T X2) |
Housing + power supply | Tower type housing + 850W |
OS | Ubuntu 20.04 |
We considered the configuration according to the conditions of your request.
MetaWRAP is important to improve the CPU and memory specifications, so it seems that the CPU and memory conditions you request are a good choice that matches your budget.
In addition, MetaWRAP has a large database capacity of several hundred gigabytes in total, so the storage configuration is designed with this point in mind.
The configuration of this case study is based on the conditions given by the customer.
Please feel free to contact us even if you are considering different conditions from what is posted.
■FAQ・What is metagenomic analysis? ・What is MetaWRAP? reference:MetaWRAP *Jumps to an external site
・What is MetaSanity? reference:Meta Sanity *Jumps to an external site
・What is KEGG? reference:KEGG *Jumps to an external site
・What is BLAST? reference:BLAST *Jumps to an external site
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