DeepLabCut machine (December 2024 version)

A customer involved in forest research enquired about a PC that would enable them to comfortably run DeepLabCut, Metashape, R and QGIS.
The priority of the software used is R, QGIS, DeepLabCut, and Metashape. The software must be able to withstand long periods of continuous use.
In terms of specific specifications, the customer requested a network card that supports 10GbE and a second HDD of 4TB or more that they could replace themselves later.

Taking these conditions into consideration, we proposed the following specifications:

CPU	Intel Xeon W5-2565X 3.20GHz (up to 3.0GHz at TB4.8) 18C/36T
memory	Total 256GB DDR5 5600 REG ECC 64GB x 4
Storage 1	2TB SSD M.2 NVMe Gen4
Storage 2	4TB HDD S-ATA
Video	NVIDIA Geforce RTX4090 24GB
network	on board (2.5GbE x1 /10GbE x1)
Housing + power supply	Middle tower case + 1500W
OS	Microsoft Windows 11 Professional 64bit

GPU performance is important for DeepLabCut

We selected a CPU and GPU that fits your budget, with an emphasis on using DeepLabCut. GPU performance is important for DeepLabCut, so a model with 8GB or more of video memory is recommended. For this reason, we chose the top model of the GeForce series, the RTX4090 24GB.

Please note that this configuration does not include the installation of DeepLabCut. Please let us know if you would like to install it.

CPU and memory limits

The CPU is the Core i9-14900K, and the memory capacity is 128GB. Please note that this CPU specification does not allow for any additional memory expansion.

Metashape requires different specifications depending on the processing content.

For Metashape, the memory capacity required varies depending on the number of images to be processed, their resolution, size, and processing quality. Please refer to the URL below to check if there are any problems with the processing content and installed memory capacity.

Overseas Product Optimization PC Manufacturing Service-Example of Metashape

Storage Configuration

Storage is assumed to be used with R, and 2TB SSD M.2, 2^nd We have added a 4TB HDD. This can be changed according to your usage, so please let us know your preference.

 

■ Keywords ・What is DeepLabCut? DeepLabCut is an open source deep learning tool for analyzing animal behavior. It can identify specific body parts of animals from videos and track them without markers, providing highly accurate movement analysis. Reference: DeepLabCut — The Mathis Lab of Adaptive Intelligence *Jumps to an external site ・What is R? R is an open source and free software programming language/development execution environment for statistical analysis.Used in calculations and graphing for statistical processing. Since many libraries exist, complex techniques can be handled by simply calling the library. reference:The R Project for Statistical Computing*Jumps to an external site ・What is QGIS? QGIS is an open source GIS software developed by the QGIS Development Team. It supports visualization, editing, and analysis of spatial data with an interface similar to ArcGIS.Its functions are limited compared to ArcGIS, but it is suitable for personal and educational purposes due to its free use and community support, and is used worldwide. Reference: QGIS Free and Open Source Geographic Information System *Jumps to an external site ・What is QGIS? QGIS is an open source GIS software developed by the QGIS Development Team. It supports visualization, editing, and analysis of spatial data with an interface similar to ArcGIS.Its functions are limited compared to ArcGIS, but it is suitable for personal and educational purposes due to its free use and community support, and is used worldwide. Reference: QGIS Free and Open Source Geographic Information System *Jumps to an external site

 

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