A customer asked us about a machine for using the tool "AlphaFold2" for analyzing the three-dimensional structure of proteins.Case No.PC 9327I would like a similar machine.
Since some parts of the configuration of PC-9327 are discontinued, we proposed a specification that uses the Xeon W-2200 series, which uses almost the same architecture.
With AlphaFold2, the performance of the storage device that stores the database is not very useful because the part of the calculation process that is affected by GPU performance is quite large, and the size of the database is as large as 2.7 TB, and it is accessed frequently even during calculation. affect.
In this configuration, the storage for the database is a 4TB HDD, but if speed is important, example No.PC-10260APlease consider.
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【Main Specifications】
| CPU | Xeon W-2255 (3.70GHz 10 cores) |
| memory | 64GB |
| Storage 1 | 500GB SSD S-ATA |
| Storage 2 | 4TB HDD S-ATA |
| video | Nvidia RTX A4000 |
| network | on board (10/100 / 1000Base-T x1 5G x1) |
| Housing + power supply | Middle tower case + 850W |
| OS | Ubuntu 20.04 |
| Others | Install CUDA Toolkit 11 |
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